- **Add SPDX license headers to python source files** - **Check for SPDX headers using pre-commit** commit 9d7ef44c3cfb72ca4c32e1c677d99259d10d4745 Author: Russell Bryant <rbryant@redhat.com> Date: Fri Jan 31 14:18:24 2025 -0500 Add SPDX license headers to python source files This commit adds SPDX license headers to python source files as recommended to the project by the Linux Foundation. These headers provide a concise way that is both human and machine readable for communicating license information for each source file. It helps avoid any ambiguity about the license of the code and can also be easily used by tools to help manage license compliance. The Linux Foundation runs license scans against the codebase to help ensure we are in compliance with the licenses of the code we use, including dependencies. Having these headers in place helps that tool do its job. More information can be found on the SPDX site: - https://spdx.dev/learn/handling-license-info/ Signed-off-by: Russell Bryant <rbryant@redhat.com> commit 5a1cf1cb3b80759131c73f6a9dddebccac039dea Author: Russell Bryant <rbryant@redhat.com> Date: Fri Jan 31 14:36:32 2025 -0500 Check for SPDX headers using pre-commit Signed-off-by: Russell Bryant <rbryant@redhat.com> --------- Signed-off-by: Russell Bryant <rbryant@redhat.com>
245 lines
7.9 KiB
Python
245 lines
7.9 KiB
Python
# SPDX-License-Identifier: Apache-2.0
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# Helper functions for 3D sparse pattern
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# These function are not optimized and very inefficient.
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# Avoid calling them too frequent or use a cache mechanism.
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from functools import lru_cache
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import numpy as np
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import torch
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import triton
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class csr_matrix:
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"""Simple implementation of CSR matrix conversion without scipy.
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This replaced scipy.sparse.csr_matrix() previously used."""
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def __init__(self, input_array):
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if not isinstance(input_array, np.ndarray):
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raise ValueError("Input must be a NumPy array")
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self.shape = input_array.shape
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rows, cols = self.shape
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data = []
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indices = []
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indptr = [0]
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for i in range(rows):
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for j in range(cols):
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if input_array[i, j]:
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data.append(input_array[i, j])
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indices.append(j)
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indptr.append(len(indices))
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self.data = np.array(data)
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self.indices = np.array(indices)
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self.indptr = np.array(indptr)
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def dense_to_crow_col(x: torch.Tensor):
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"""Turning a 2D/3D torch tensor (x) to CSR rows/cols indexing.
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NOTE: col_indices padded -1
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"""
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device = x.device
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pad = -1
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dim = x.dim()
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assert x.dim() in (2, 3)
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if x.dim() == 2:
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x = x[None]
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x = [csr_matrix(xi.bool().cpu().numpy()) for xi in x]
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crows = torch.vstack([torch.from_numpy(xi.indptr) for xi in x])
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cols = [torch.from_numpy(xi.indices) for xi in x]
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max_cols = max(len(xi) for xi in cols)
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cols = [
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torch.cat([xi, pad + xi.new_zeros(max_cols - xi.shape[0])])
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for xi in cols
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]
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cols = torch.vstack(cols)
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if dim == 2:
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crows = crows[0]
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cols = cols[0]
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return crows.to(device), cols.to(device)
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def crow_col_to_dense(crows: torch.Tensor,
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cols: torch.Tensor,
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dtype: torch.dtype = torch.float16):
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dim = crows.dim()
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if dim == 1:
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crows = crows[None]
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cols = cols[None]
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device = crows.device
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crows, cols = crows.cpu(), cols.cpu() # faster in cpu
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shape = (crows.shape[0], crows.shape[1] - 1, cols.max() + 1)
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x = torch.zeros(shape, dtype=dtype)
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for i in range(shape[0]):
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for j in range(shape[1]):
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x[i, j, cols[i, crows[i, j]:crows[i, j + 1]]] = 1
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if dim == 1:
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x = x[0]
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return x.to(device)
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def dense_to_ccol_row(x: torch.Tensor):
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"""Similar, but to CSC format"""
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x = x.transpose(-2, -1)
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return dense_to_crow_col(x)
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def ccol_row_to_dense(ccol: torch.Tensor,
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rows: torch.Tensor,
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dtype: torch.dtype = torch.float16):
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return crow_col_to_dense(ccol, rows, dtype).permute(0, 2, 1).contiguous()
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def _get_sparse_attn_mask_homo_head(
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q_len: int,
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max_seqlen: int,
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dtype: torch.dtype,
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device: torch.device,
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block_size: int = 128,
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local_blocks: int = 4,
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vert_stride: int = 4,
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return_dense: bool = False,
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):
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"""
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:return: a tuple of 3:
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- tuple of crow_indices, col_indices representation
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of CSR format.
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- block dense mask
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- all token dense mask (be aware that it can be
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OOM if it is too big) if `return_dense==True`,
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otherwise, None
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"""
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with torch.no_grad():
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num_blocks = triton.cdiv(max_seqlen, block_size)
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q_pos = torch.arange(num_blocks)[:, None]
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k_pos = torch.arange(num_blocks)[None]
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mask_vert_strided = (torch.arange(num_blocks) + 1) % vert_stride == 0
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block_mask_dense = (((q_pos >= k_pos)
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& ((q_pos - k_pos < local_blocks)
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| mask_vert_strided)).to(device).to(dtype))
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num_blocks_q = triton.cdiv(q_len, block_size)
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block_mask_dense_output = (dense_to_crow_col(
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block_mask_dense[-num_blocks_q:].contiguous()))
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if return_dense:
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mask_dense = torch.kron(
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block_mask_dense,
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block_mask_dense.new_ones((block_size, block_size)),
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)
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causal_mask = torch.tril(torch.ones(
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max_seqlen, max_seqlen)).type_as(mask_dense)[-q_len:]
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mask_dense = mask_dense[-q_len:, :max_seqlen] * causal_mask
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return (
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block_mask_dense_output,
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block_mask_dense,
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mask_dense,
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)
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else:
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return (
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block_mask_dense_output,
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block_mask_dense,
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None,
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)
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def binary_mask_to_bias(mask_dense: torch.Tensor):
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mask_dense = 1 - mask_dense
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mask_dense.masked_fill_(mask_dense.bool(), -torch.inf)
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return mask_dense
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def get_head_sliding_step(n_heads: int,
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vert_stride: int,
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homo_head: bool = False):
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if homo_head:
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return 0
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return max(1, int(vert_stride / n_heads))
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@lru_cache
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def get_sparse_attn_mask(
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n_heads: int,
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q_len: int,
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max_seqlen: int,
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dtype: torch.dtype,
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device: torch.device,
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block_size: int = 64,
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local_blocks: int = 4,
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vert_stride: int = 4,
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homo_head: bool = True,
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return_dense: bool = False,
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dense_mask_type: str = "binary",
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):
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"""
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:param dense_mask_type: "binary" (0 for skip token, 1 for others)
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or "bias" (-inf for skip token, 0 or others)
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:return: a tuple of 3:
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- tuple of crow_indices, col_indices representation
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of CSR format.
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- block dense mask
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- all token dense mask (be aware that it can be OOM if it
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is too big) if `return_dense==True`, otherwise, None
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"""
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assert dense_mask_type in ("binary", "bias")
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if homo_head:
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with torch.no_grad():
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(crow, col), block_mask_dense, mask_dense = (
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_get_sparse_attn_mask_homo_head(
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q_len,
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max_seqlen,
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dtype,
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device,
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block_size,
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local_blocks,
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vert_stride,
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return_dense,
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))
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crow = crow[None].expand(n_heads, crow.shape[0])
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col = col[None].expand(n_heads, col.shape[0])
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if return_dense:
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mask_dense = mask_dense[None].expand(n_heads,
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*mask_dense.shape)
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if dense_mask_type == "bias":
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mask_dense = binary_mask_to_bias(mask_dense)
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return (crow, col), block_mask_dense, mask_dense
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with torch.no_grad():
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num_blocks = triton.cdiv(max_seqlen, block_size)
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q_pos = torch.arange(num_blocks)[None, :, None]
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k_pos = torch.arange(num_blocks)[None, None]
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head_sliding_step = get_head_sliding_step(n_heads, vert_stride)
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mask_vert_strided = [
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(torch.arange(num_blocks) + h * head_sliding_step + 1) %
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vert_stride == 0 for h in range(n_heads)
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]
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mask_vert_strided = torch.vstack(mask_vert_strided).unsqueeze(1)
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block_mask_dense = (((q_pos >= k_pos)
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& ((q_pos - k_pos < local_blocks)
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| mask_vert_strided)).to(device).to(dtype))
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num_blocks_q = triton.cdiv(q_len, block_size)
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block_mask_dense_output = block_mask_dense[:, -num_blocks_q:]
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if return_dense:
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mask_dense = torch.kron(
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block_mask_dense,
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block_mask_dense.new_ones((block_size, block_size)),
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)
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causal_mask = torch.tril(torch.ones(
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max_seqlen, max_seqlen)).type_as(mask_dense)[-q_len:]
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mask_dense = mask_dense[..., -q_len:, :max_seqlen] * causal_mask[None]
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if dense_mask_type == "bias":
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mask_dense = binary_mask_to_bias(mask_dense)
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return (
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dense_to_crow_col(block_mask_dense_output),
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block_mask_dense,
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mask_dense,
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)
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else:
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return (
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dense_to_crow_col(block_mask_dense_output),
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block_mask_dense,
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None,
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)
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